Scolanthus callimorphus

Overview
Full NameScolanthus callimorphus
GenusScolanthus
Speciescallimorphus
Common NameWorm anemone
AbbreviationScal
The worm anemone has an elongated column measuring up to 14 cm in length and 12 mm in diameter. The tentacles are relatively stout, very long and up to 16 in number. Tentacles are transparent becoming strongly tinted with brown in the outer half, spotted with opaque white or cream, the spots becoming larger towards the tips where they tend to form transverse bars. The disc is pale buff or cream, with a well-defined pattern of rich, often purplish-brown.

Information from: MaLIN
Downloads
Scal100 Genome Assembly Scal100.fasta
Transcripts (NY_Scal100_v1) NY_Scal100_v1.20200813.transcript.fasta
Proteins (NY_Scal100_v1) NY_Scal100_v1.20200813.proteins.fasta
GFF3 (NY_Scal100_v1) NY_Scal100_v1.20200813.gff



See Data Analysis page for a listing of the Analyses performed on Scal100 genome assembly and gene models. The FASTAs and GFF for the gene models can also be found there for download.

Feature Summary
The following features are currently present for this organism
Feature TypeCount
exon210,866
CDS209,306
polypeptide49,188
mRNA24,594
gene24,594
supercontig304
Data Analyses

All data loaded into SIMRbase has an "Analysis Page". These pages provide information about the methods and provide a link to download the files.

Namesort descending Program Source
Scolanthus callimorphus Genome Assembly (Scal100) zimmerman Scal100.fasta
Scolanthus callimorphus NY_Scal100_v1 BLASTX Cavefish e!100 BLASTX NY_Scal100_v1_ BLASTX Cavefish
Scolanthus callimorphus NY_Scal100_v1 BLASTX Celegans e!100 BLASTX NY_Scal100_v1_ BLASTX Celegans
Scolanthus callimorphus NY_Scal100_v1 BLASTX Fly e!100 BLASTX NY_Scal100_v1_ BLASTX Fly
Scolanthus callimorphus NY_Scal100_v1 BLASTX Human e!100 BLASTX NY_Scal100_v1_ BLASTX Human
Scolanthus callimorphus NY_Scal100_v1 BLASTX Lamprey e!100 BLASTX NY_Scal100_v1_ BLASTX Lamprey
Scolanthus callimorphus NY_Scal100_v1 BLASTX Medaka e!100 BLASTX NY_Scal100_v1_ BLASTX Medaka
Scolanthus callimorphus NY_Scal100_v1 BLASTX Mouse e!100 BLASTX NY_Scal100_v1_ BLASTX Mouse
Scolanthus callimorphus NY_Scal100_v1 BLASTX Nematostella e!Metazoa46 BLASTX NY_Scal100_v1_ BLASTX Nematostella
Scolanthus callimorphus NY_Scal100_v1 BLASTX Smed smeg BLASTX NY_Scal100_v1_ BLASTX Smed smeg
Scolanthus callimorphus NY_Scal100_v1 BLASTX Uniprot BLASTX NY_Scal100_v1_ BLASTX Uniprot
Scolanthus callimorphus NY_Scal100_v1 BLASTX Xenopus e!100 BLASTX NY_Scal100_v1_ BLASTX Xenopus
Scolanthus callimorphus NY_Scal100_v1 BLASTX Yeast e!100 BLASTX NY_Scal100_v1_ BLASTX Yeast
Scolanthus callimorphus NY_Scal100_v1 BLASTX Zebrafish e!100 BLASTX NY_Scal100_v1_ BLASTX Zebrafish
Scolanthus callimorphus NY_Scal100_v1 IPRSCAN IPRSCAN NY_Scal100_v1_iprscan
Scolanthus callimorphus NY_Scal100_v1 Mapped GFF zimmerman NY_Scal100_v1.20200813.gff
Scolanthus callimorphus NY_Scal100_v1 Proteins FASTA zimmerman NY_Scal100_v1.20200813.proteins.fasta
Scolanthus callimorphus NY_Scal100_v1 Transcript FASTA zimmerman NY_Scal100_v1.20200813.transcript.fasta